SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.03G016700

Description hypothetical protein

Gene interval Chr03:1683395–1688893 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT4G00740:QUA3:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features461Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records17

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0369.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

461 matching features · page 8 of 47

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P06381 6',7'-Dihydroxybergamottin 372.1547 15.828e-12
P06402 Lysylmethionine 277.1458 14.91e-12
P06763 N-Desmethylzolmitriptan 273.1467 17.252e-11
P06780 N-Benzyl-D-glucamine 271.1425 13.264e-13
P07329 Matteucinol 7-rhamnoside 460.1725 15.293e-12
P07338 Cedpht 304.1446 11.646e-12
P07352 Benzoxazole 119.0351 11.184e-11
P07425 Maltol 6'-O-beta-D-apiofuranosyl-beta-D-glucopyranoside 420.1274 11.991e-11
P07452 (+)-Duocarmycin A 507.1625 17.305e-14
P07653 Guavin B 694.1246 19.543e-12