SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.02G304000

Description hypothetical protein

Gene interval Chr02:47908136–47915999 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G51350:AT1G51350:ARM repeat superfamily protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features264Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records4

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0152.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

264 matching features · page 19 of 27

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P34921 Xyloccensin O 700.2387 13.689e-11
P35059 Benzyl 3-methylbutanoate 192.1139 15.394e-12
P35512 Strongylophorin 23 398.2795 19.075e-12
P35609 Destruxin E 593.3418 15.599e-11
P35765 Foetidissimoside A 1058.5215 19.301e-11
P36838 Sildenafil 474.2046 17.012e-11
P36994 Sorbistin C 342.1651 13.446e-11
P37322 7beta-ethynyl-4a,5,6,7,8,8abeta-Hexahydro-1alpha-hydroxy-1,4ab-dimethyl-2(1H)-naphthalenone 218.1294 14.053e-11
P37333 Xanthobaccin C 494.2826 16.815e-11
P37371 Arginylvaline 273.1780 11.345e-11