SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.02G125700

Description hypothetical protein

Gene interval Chr02:12589185–12591860 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features87Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

87 matching features · page 2 of 9

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P11322 No candidate annotation 655.2406 12.757e-11
P11491 Kaempferol 7,4'-dimethyl ether 3-O-sulfate 394.0315 15.228e-13
P12266 Myricetin 3-neohesperidoside 626.1482 12.478e-11
P12520 L-Leucine-p-nitroanilide 251.1255 19.374e-12
P12632 Nitazoxanide 307.0204 13.23e-11
P13589 Sinapoyl aldehyde 208.0733 13.025e-11
P13946 Ethyl (E)-3-diethoxyphosphinothioyloxybut-2-enoate 282.0724 11.4e-12
P15103 2-Methyl-2H-1,3-benzoxazin-4(3H)-one 163.0620 11.254e-11
P15842 No candidate annotation 505.1794 14.236e-11
P16221 Ganomastenol C 254.1849 14.377e-11