SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.02G107400

Description hypothetical protein

Gene interval Chr02:10245905–10246706 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features157Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

157 matching features · page 2 of 16

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P04848 Nitrobenzene 123.0319 13.965e-11
P05646 No candidate annotation 253.5709 11.559e-11
P05749 2-Methacryloyloxyethyl phosphorylcholine 295.1196 19.768e-13
P06146 4-Formylsalicylic acid 166.0251 18.7e-13
P06381 6',7'-Dihydroxybergamottin 372.1547 11.436e-11
P06403 Tintamine 367.1305 15.059e-11
P06565 N-[(5-{2-[(6R)-2-Amino-4-oxo-3,4,5,6,7,8-hexahydropyrido[2,3-D]pyrimidin-6-YL]ethyl}-2-thienyl)carbonyl]-L-glutamic acid 449.1443 13.473e-11
P06635 Xylogranatinin 192.0544 13.269e-11
P06744 No candidate annotation 352.9963 19.826e-11
P06909 3-Propylpyridine 121.0876 17.147e-11