SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.02G061700

Description hypothetical protein

Gene interval Chr02:5577271–5582873 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT2G23450:AT2G23450:Protein kinase superfamily protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features132Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records26

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.1970.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

132 matching features · page 7 of 14

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P18070 Cymbidine A 949.4154 12.804e-11
P18220 Butanoic acid, 3-((2-naphthalenylsulfonyl)amino)-4-oxo-4-((2-phenylethyl)amino)-, (S)- 426.1180 19.554e-11
P18372 N-Acetylphenylalanine beta-naphthyl ester 333.1364 13.047e-12
P18759 No candidate annotation 760.1825 18.557e-12
P18832 No candidate annotation 151.1060 12.682e-11
P20666 Benzenebutanoic acid, 4-((3-(4-acetyl-3-hydroxy-2-propylphenoxy)propyl)thio)-gamma-hydroxy-beta-methyl-, (R*,S*)- 460.1910 17.668e-11
P20995 Renieramycin R 605.2442 17.64e-12
P22382 Diphenylcarbazide 242.1167 16.859e-11
P23279 Tezacaftor 520.1853 14.357e-12
P23629 Cycloshizukaol A 548.2409 14.412e-11