SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.01G166400

Description hypothetical protein

Gene interval Chr01:50404781–50436297 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT4G36080:AT4G36080:phosphotransferases/inositol or phosphatidylinositol kinase

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features204Overlap
Maximum supporting SNP records4
Features with ≥2 supporting SNP records202

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.7647.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

204 matching features · page 21 of 21

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P54402 Catuabine E 371.1815 24.258e-11
P55256 No candidate annotation 663.1790 24.113e-11
P25270 (6E)-8-Oxogeraniol 168.1138 11.041e-14
P42822 5,6-Epoxyoctadeca-7,9-diynoic acid 290.1863 14.713e-18