SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.01G073200

Description carotenoid cleavage dioxygenase 7

Gene interval Chr01:13869095–13874989 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT2G44990:CCD7:carotenoid cleavage dioxygenase 7

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3 matching features · page 1 of 1

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P05370 9-(4-Hydroxyphenyl)-2-methoxy-1H-phenalen-1-one 302.0934 17.008e-11
P05535 Cysteine 121.0187 18.544e-11
P10689 1-(Pentafluorophenyl)propane 210.0480 15.499e-11