Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P08885 (5R,6S)-5,6-Epoxy-7-megastigmen-9-one 208.1431 209.1505 132
P09401 1-dodecanoyl-glycero-3-phosphoserine 441.2078 442.2136 132
P11790 136.0860 137.0936 132
P11944 2-Methoxyacetaminophen glucuronide 357.1057 358.1110 132
P12409 Ericamycin 499.1248 500.1304 132
P14079 Methyl salicylate O-[rhamnosyl-(1->6)-glucoside] 460.1563 461.1634 132
P17202 2,3-Dihydro-1H-pyrrolizine-5-carboxaldehyde 135.0669 136.0743 132
P21264 161.0127 162.0209 132
P21412 Anadur 506.3413 507.3481 132
P23158 Methyl n-formylanthranilate 179.0589 180.0657 132

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G032000 hypothetical protein AT4G01270:AT4G01270:RING/U-box superfamily protein 92
Glyma.16G145300 hypothetical protein AT2G35780:scpl26:serine carboxypeptidase-like 26__AT3G07990:SCPL27:serine carboxypeptidase-like 27 92
Glyma.16G194000 hypothetical protein AT3G48900:AT3G48900:single-stranded DNA endonuclease family protein 92
Glyma.17G005900 hypothetical protein AT4G17215:AT4G17215:Pollen Ole e 1 allergen and extensin family protein__AT2G40113:AT2G40113:Pollen Ole e 1 allergen and extensin family protein 92
Glyma.17G215200 hypothetical protein NA 92
Glyma.20G219100 hypothetical protein AT3G02830:ZFN1:zinc finger protein 1 92
Glyma.03G070600 hypothetical protein AT1G74710:EDS16:ADC synthase superfamily protein 91
Glyma.12G059300 hypothetical protein NA 91
Glyma.15G262100 hypothetical protein AT1G79550:PGK:phosphoglycerate kinase 91
Glyma.16G194100 hypothetical protein NA 91