Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P35704 Phenol, 2-(2H-benzotriazol-2-yl)-4,6-bis(1,1-dimethylpropyl)- 351.2332 352.2403 144
P55192 2-Hydroxy-24-keto-octacosanolide 452.3854 453.3951 144
P00964 Glutarimide 113.0469 227.1009 143
P11762 (S)-ATPA 228.1093 229.1177 143
P16245 173.1267 174.1346 143
P18452 409.1206 410.1280 143
P26523 3-(3,5-dihydroxyphenyl)-4-(2-{3-[6-hydroxy-3-(3-hydroxyphenyl)-2-phenyl-2,3-dihydro-1-benzofuran-4-yl]-2-phenyl-2,3-dihydro-1-benzofuran-5-yl}ethenyl)-2-(4-hydroxyphenyl)-2,3-dihydro-1-benzofuran-5,6-diol 874.2788 875.2828 143
P28153 Dehydroprotostemonine 415.2032 416.2104 143
P42603 463.1322 464.1409 143
P48055 1-hexadecyl-2-(9Z-nonadecenoyl)-glycero-3-phospho-(1'-sn-glycerol) 748.5600 749.5665 143

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G032000 hypothetical protein AT4G01270:AT4G01270:RING/U-box superfamily protein 92
Glyma.16G145300 hypothetical protein AT2G35780:scpl26:serine carboxypeptidase-like 26__AT3G07990:SCPL27:serine carboxypeptidase-like 27 92
Glyma.16G194000 hypothetical protein AT3G48900:AT3G48900:single-stranded DNA endonuclease family protein 92
Glyma.17G005900 hypothetical protein AT4G17215:AT4G17215:Pollen Ole e 1 allergen and extensin family protein__AT2G40113:AT2G40113:Pollen Ole e 1 allergen and extensin family protein 92
Glyma.17G215200 hypothetical protein NA 92
Glyma.20G219100 hypothetical protein AT3G02830:ZFN1:zinc finger protein 1 92
Glyma.03G070600 hypothetical protein AT1G74710:EDS16:ADC synthase superfamily protein 91
Glyma.12G059300 hypothetical protein NA 91
Glyma.15G262100 hypothetical protein AT1G79550:PGK:phosphoglycerate kinase 91
Glyma.16G194100 hypothetical protein NA 91