Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P48296 6-Chloro-7,8-dihydroxy-3-allyl-1-phenyl-2,3,4,5-tetrahydro-1H-3-benzazepine 329.1186 330.1296 120
P49853 Phenyl phosphonothioate 173.9908 174.9983 120
P00760 Flustramine H 404.1438 405.1541 119
P02946 Maremycin C1 379.1215 380.1274 119
P05035 350.0293 351.0357 119
P05672 5-Amino-6-(5'-phosphoribosylamino)uracil 354.0577 355.0635 119
P06761 Carthamoside B4 506.1973 507.2035 119
P07748 Bocconoline 379.1471 380.1538 119
P10104 641.2594 642.2689 119
P16160 Ulexone D 418.1443 419.1537 119

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G032000 hypothetical protein AT4G01270:AT4G01270:RING/U-box superfamily protein 92
Glyma.16G145300 hypothetical protein AT2G35780:scpl26:serine carboxypeptidase-like 26__AT3G07990:SCPL27:serine carboxypeptidase-like 27 92
Glyma.16G194000 hypothetical protein AT3G48900:AT3G48900:single-stranded DNA endonuclease family protein 92
Glyma.17G005900 hypothetical protein AT4G17215:AT4G17215:Pollen Ole e 1 allergen and extensin family protein__AT2G40113:AT2G40113:Pollen Ole e 1 allergen and extensin family protein 92
Glyma.17G215200 hypothetical protein NA 92
Glyma.20G219100 hypothetical protein AT3G02830:ZFN1:zinc finger protein 1 92
Glyma.03G070600 hypothetical protein AT1G74710:EDS16:ADC synthase superfamily protein 91
Glyma.12G059300 hypothetical protein NA 91
Glyma.15G262100 hypothetical protein AT1G79550:PGK:phosphoglycerate kinase 91
Glyma.16G194100 hypothetical protein NA 91