Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P26284 Corrigendum 590.1892 591.1976 129
P27196 Antibiotic FD 594 940.3276 941.3375 129
P31577 968.3495 969.3536 129
P32883 1-(9Z-octadecenoyl)-2-(9-oxo-nonanoyl)-sn-glycero-3-phosphoethanolamine 633.3895 634.3964 129
P36118 236.1708 237.1801 129
P37717 Lucuminamide 445.1590 446.1656 129
P38740 Carisoprodol 260.1737 261.1819 129
P39537 5-Megastigmen-7-yne-3,9-diol 9-glucoside 370.1958 371.2027 129
P40703 Clofoctol 364.1357 365.1423 129
P43372 760.9345 761.9450 129

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G032000 hypothetical protein AT4G01270:AT4G01270:RING/U-box superfamily protein 92
Glyma.16G145300 hypothetical protein AT2G35780:scpl26:serine carboxypeptidase-like 26__AT3G07990:SCPL27:serine carboxypeptidase-like 27 92
Glyma.16G194000 hypothetical protein AT3G48900:AT3G48900:single-stranded DNA endonuclease family protein 92
Glyma.17G005900 hypothetical protein AT4G17215:AT4G17215:Pollen Ole e 1 allergen and extensin family protein__AT2G40113:AT2G40113:Pollen Ole e 1 allergen and extensin family protein 92
Glyma.17G215200 hypothetical protein NA 92
Glyma.20G219100 hypothetical protein AT3G02830:ZFN1:zinc finger protein 1 92
Glyma.03G070600 hypothetical protein AT1G74710:EDS16:ADC synthase superfamily protein 91
Glyma.12G059300 hypothetical protein NA 91
Glyma.15G262100 hypothetical protein AT1G79550:PGK:phosphoglycerate kinase 91
Glyma.16G194100 hypothetical protein NA 91