Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P23907 968.2928 969.3031 132
P26825 850.3598 851.3632 132
P30950 14-Hydroxycathovaline 442.2134 443.2199 132
P33509 2-Hydroxy-6-oxo-6-(2-hydroxyphenoxy)-hexa-2,4-dienoate 250.0469 251.0549 132
P34626 Microtoenin C 941.5073 942.5094 132
P55525 271.1993 272.2052 132
P04118 9-Methoxy-7-phenyl-5H-furo[3,2-g][1]benzopyran-5-one 292.0726 293.0816 131
P06579 4-O-Methylascochlorin 418.1920 419.1981 131
P07063 Suffruticoside E 622.2095 623.2178 131
P08863 428.0566 429.0641 131

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.12G003500 hypothetical protein AT5G61670:AT5G61670:orange protein 94
Glyma.08G136700 hypothetical protein NA 93
Glyma.14G209100 hypothetical protein NA 93
Glyma.14G209800 hypothetical protein AT5G17240:SDG40:SET domain group 40 93
Glyma.14G209900 hypothetical protein NA 93
Glyma.15G108100 hypothetical protein NA 93
Glyma.03G037300 hypothetical protein NA 92
Glyma.09G065900 hypothetical protein NA 92
Glyma.09G066000 hypothetical protein NA 92
Glyma.09G066200 hypothetical protein AT5G57030:LUT2:Lycopene beta/epsilon cyclase protein 92