Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P28434 5,6-Epoxyoctadeca-7,9-diynoic acid 290.1834 291.1921 152
P36874 755.3385 756.3510 152
P42174 Verbesinoside E 1056.5399 1057.5471 152
P07213 Boc-L-cysteine 221.0741 222.0824 151
P12840 Isobutyl beta-D-glucopyranoside 236.1250 237.1317 151
P18633 Butanedioic acid, octenyl- 228.1353 229.1411 151
P20625 Lamiuside D 816.2663 817.2710 151
P26089 Kni 102 595.2949 596.3000 151
P31937 173.1467 174.1553 151
P43039 10-((1H-indol-3-ylcarbonyl)3,6-dideoxy-alpha-L-arabino-hexopyranosyloxy)-decanoic acid 461.2433 462.2502 151

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G144900 hypothetical protein AT2G23540:AT2G23540:GDSL-like Lipase/Acylhydrolase superfamily protein 96
Glyma.18G227400 hypothetical protein AT2G45720:AT2G45720:ARM repeat superfamily protein 96
Glyma.19G037200 hypothetical protein AT5G15680:AT5G15680:ARM repeat superfamily protein 96
Glyma.19G037400 hypothetical protein AT5G38820:AT5G38820:Transmembrane amino acid transporter family protein 96
Glyma.19G038000 hypothetical protein AT3G02350:GAUT9:galacturonosyltransferase 9 96
Glyma.19G038300 hypothetical protein NA 96
Glyma.19G038400 hypothetical protein AT3G02360:AT3G02360:6-phosphogluconate dehydrogenase family protein 96
Glyma.19G247800 hypothetical protein NA 96
Glyma.08G104600 hypothetical protein AT1G27930:AT1G27930:glucuronoxylan 4-O-methyltransferase-like protein (DUF579) 95
Glyma.06G184100 hypothetical protein NA 94