Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P22570 Hydroxy-2-naphthalenylmethylphosphonic acid tris-acetoxymethyl ester 426.0688 427.0782 127
P22608 409.6797 410.6861 127
P28438 Ashimycin B 639.2807 640.2847 127
P29700 Hyponine E 920.2908 921.3011 127
P30027 147.0583 148.0656 127
P31845 Indane 118.0777 119.0847 127
P32073 Tibouchinin 800.2208 801.2300 127
P34478 Methyl N-({(2s,3s)-3-[(Propylamino)carbonyl]oxiran-2-Yl}carbonyl)-L-Isoleucyl-L-Prolinate 397.2195 795.4490 127
P34804 10-ethoxy-2methylene-10-oxodecanoic acid 242.1514 243.1586 127
P35219 Tetradenolide 214.1188 215.1264 127

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G144900 hypothetical protein AT2G23540:AT2G23540:GDSL-like Lipase/Acylhydrolase superfamily protein 96
Glyma.18G227400 hypothetical protein AT2G45720:AT2G45720:ARM repeat superfamily protein 96
Glyma.19G037200 hypothetical protein AT5G15680:AT5G15680:ARM repeat superfamily protein 96
Glyma.19G037400 hypothetical protein AT5G38820:AT5G38820:Transmembrane amino acid transporter family protein 96
Glyma.19G038000 hypothetical protein AT3G02350:GAUT9:galacturonosyltransferase 9 96
Glyma.19G038300 hypothetical protein NA 96
Glyma.19G038400 hypothetical protein AT3G02360:AT3G02360:6-phosphogluconate dehydrogenase family protein 96
Glyma.19G247800 hypothetical protein NA 96
Glyma.08G104600 hypothetical protein AT1G27930:AT1G27930:glucuronoxylan 4-O-methyltransferase-like protein (DUF579) 95
Glyma.06G184100 hypothetical protein NA 94