Soybean mGWAS DB
Explore metabolite–gene associations from soybean metabolome GWAS results.
This database supports bidirectional navigation between metabolites and genes,
with linked detail pages for association evidence and mass-based compound candidates.
SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.
Explore by Metabolite
Search metabolites by metabolite ID or candidate names, formulas or compound IDs.
| Metabolite ID | Candidate annotation | Deionized mass (Da) | Average m/z | Associated genes (overlap) |
|---|---|---|---|---|
| P47541 | 3R-hydroxy-14R-((1H-indol-3-ylcarbonyl)3,6-dideoxy-alpha-L-arabino-hexopyranosyloxy)-pentadecanoic acid | 547.3248 | 548.3360 | 133 |
| P49951 | (6E,8E,10R,12Z)-10-Hydroxy-3-oxooctadecatrienoic acid | 308.2041 | 309.2129 | 133 |
| P52735 | Cypendazole | 329.1478 | 330.1538 | 133 |
| P00905 | Metiazinic acid | 271.0675 | 272.0757 | 132 |
| P02658 | 5,7,3',4',5'-Pentahydroxyflavanone | 304.0541 | 305.0611 | 132 |
| P02741 | Parbendazole | 247.1324 | 248.1384 | 132 |
| P04385 | 5-Hydroxy-3,4,7-triphenyl-2,6-benzofurandione | 392.1077 | 393.1155 | 132 |
| P05960 | 559.1606 | 560.1669 | 132 | |
| P07338 | Cedpht | 304.1446 | 305.1509 | 132 |
| P07617 | Nitrogen mustard | 155.0286 | 156.0359 | 132 |
Explore by Gene
Search genes by gene ID, alias, description, or Arabidopsis ortholog information.
| Gene ID | Alias | Description | Arabidopsis ortholog | Associated metabolites (overlap) |
|---|---|---|---|---|
| Glyma.16G069300 | hypothetical protein | AT3G01600:NAC044:NAC domain containing protein 44 | 98 | |
| Glyma.19G195600 | hypothetical protein | AT3G52570:AT3G52570:alpha/beta-Hydrolases superfamily protein | 98 | |
| Glyma.20G034000 | hypothetical protein | AT2G03060:AGL30:AGAMOUS-like 30 | 98 | |
| Glyma.03G007800 | hypothetical protein | AT4G26010:AT4G26010:Peroxidase superfamily protein | 97 | |
| Glyma.06G211700 | hypothetical protein | NA | 97 | |
| Glyma.16G138400 | hypothetical protein | NA | 97 | |
| Glyma.16G145500 | hypothetical protein | AT2G39200:MLO12:Seven transmembrane MLO family protein | 97 | |
| Glyma.18G197500 | hypothetical protein | NA | 97 | |
| Glyma.06G175200 | SEOd | NA | 96 | |
| Glyma.08G039600 | hypothetical protein | NA | 96 |