Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P05765 Lycomarasmine B 277.0881 278.0973 165
P12117 Nutlin-3 580.1626 581.1677 165
P18034 276.1936 277.2003 165
P21529 Hosloppin 392.0948 393.1016 165
P22253 360.2841 361.2899 165
P22299 Pubescenine 495.2821 496.2855 165
P29912 O-Phosphoviomycin 765.2905 766.2988 165
P42723 CJ 15208 577.2763 578.2781 165
P45180 199.1326 200.1399 165
P45663 Kopsaporine 426.1785 427.1816 165

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G069300 hypothetical protein AT3G01600:NAC044:NAC domain containing protein 44 98
Glyma.19G195600 hypothetical protein AT3G52570:AT3G52570:alpha/beta-Hydrolases superfamily protein 98
Glyma.20G034000 hypothetical protein AT2G03060:AGL30:AGAMOUS-like 30 98
Glyma.03G007800 hypothetical protein AT4G26010:AT4G26010:Peroxidase superfamily protein 97
Glyma.06G211700 hypothetical protein NA 97
Glyma.16G138400 hypothetical protein NA 97
Glyma.16G145500 hypothetical protein AT2G39200:MLO12:Seven transmembrane MLO family protein 97
Glyma.18G197500 hypothetical protein NA 97
Glyma.06G175200 SEOd NA 96
Glyma.08G039600 hypothetical protein NA 96