Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P31215 966.3363 967.3449 180
P37602 (6R)-9,10-Dihydroxy-4,7-megastigmadien-3-one-9-O-beta-D-glucopyranoside 386.1922 387.2002 180
P41095 423.3575 424.3622 180
P49211 Bamifylline 385.2106 386.2173 180
P06876 Lembyne A 342.0021 343.0076 179
P14986 N-(2-hydroxyhexadecanoyl)-sphinganine 555.5217 556.5296 179
P21946 999.3356 1000.3371 179
P23960 Upunaphenol N 934.2723 935.2842 179
P29027 Bazzanin J 492.0855 493.0949 179
P35945 475.1093 476.1172 179

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G069300 hypothetical protein AT3G01600:NAC044:NAC domain containing protein 44 98
Glyma.19G195600 hypothetical protein AT3G52570:AT3G52570:alpha/beta-Hydrolases superfamily protein 98
Glyma.20G034000 hypothetical protein AT2G03060:AGL30:AGAMOUS-like 30 98
Glyma.03G007800 hypothetical protein AT4G26010:AT4G26010:Peroxidase superfamily protein 97
Glyma.06G211700 hypothetical protein NA 97
Glyma.16G138400 hypothetical protein NA 97
Glyma.16G145500 hypothetical protein AT2G39200:MLO12:Seven transmembrane MLO family protein 97
Glyma.18G197500 hypothetical protein NA 97
Glyma.06G175200 SEOd NA 96
Glyma.08G039600 hypothetical protein NA 96