Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P02752 Polanrazine B 377.1240 378.1297 180
P06961 Norhygrine 127.0981 128.1057 180
P10476 264.6079 265.6141 180
P10479 L-Arogenate 227.0795 228.0865 180
P12237 Siwanine A 505.2575 506.2645 180
P16337 Triphyllin A 656.2395 657.2469 180
P17370 Kosinostatin 616.2046 617.2161 180
P26964 688.2990 689.3077 180
P29279 Cyromazine 166.0980 167.1049 180
P30762 5,5-Dimethyl-1-ethyl-1,3-cyclopentadiene 122.1083 123.1160 180

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G069300 hypothetical protein AT3G01600:NAC044:NAC domain containing protein 44 98
Glyma.19G195600 hypothetical protein AT3G52570:AT3G52570:alpha/beta-Hydrolases superfamily protein 98
Glyma.20G034000 hypothetical protein AT2G03060:AGL30:AGAMOUS-like 30 98
Glyma.03G007800 hypothetical protein AT4G26010:AT4G26010:Peroxidase superfamily protein 97
Glyma.06G211700 hypothetical protein NA 97
Glyma.16G138400 hypothetical protein NA 97
Glyma.16G145500 hypothetical protein AT2G39200:MLO12:Seven transmembrane MLO family protein 97
Glyma.18G197500 hypothetical protein NA 97
Glyma.06G175200 SEOd NA 96
Glyma.08G039600 hypothetical protein NA 96