Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P22338 (5S)-5-(7-Benzofuranyl)-8-chloro-3-methyl-1,2,4,5-tetrahydro-3-benzazepin-7-ol 327.1038 328.1106 113
P23965 327.2842 328.2896 113
P25505 Dracotanoside A 833.3882 834.3987 113
P27623 2,5-Diisopropyl-3-methylphenol 192.1485 193.1565 113
P28533 Ageratoside B1 988.4882 989.4915 113
P30593 GS-3 388.1637 389.1735 113
P32448 allo-Aromadendrane-10beta,14-diol 238.1913 239.1982 113
P34376 (E,E)-Geranyllinalool 290.2574 291.2657 113
P35307 Neoazedarachin A 616.3002 617.3063 113
P37634 Gualamycin 590.2188 591.2297 113

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G069300 hypothetical protein AT3G01600:NAC044:NAC domain containing protein 44 98
Glyma.19G195600 hypothetical protein AT3G52570:AT3G52570:alpha/beta-Hydrolases superfamily protein 98
Glyma.20G034000 hypothetical protein AT2G03060:AGL30:AGAMOUS-like 30 98
Glyma.03G007800 hypothetical protein AT4G26010:AT4G26010:Peroxidase superfamily protein 97
Glyma.06G211700 hypothetical protein NA 97
Glyma.16G138400 hypothetical protein NA 97
Glyma.16G145500 hypothetical protein AT2G39200:MLO12:Seven transmembrane MLO family protein 97
Glyma.18G197500 hypothetical protein NA 97
Glyma.06G175200 SEOd NA 96
Glyma.08G039600 hypothetical protein NA 96