Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54778 8'-Hydroxy-3-methoxy isodiospyrin 420.0827 421.0871 —
P54779 beta-Doradecin 580.3892 581.3981 —
P54780 Pirenzepine 351.1705 352.1780 —
P54782 Tripeptide 549.2479 550.2541 —
P54783 16S-methyl-sphing-4-enine 313.2937 314.3018 —
P54784 D-Glucosyldihydrosphingosine 463.3451 464.3554 —
P54786 1-(4-Hydroxyphenyl)-4,8-dimethyl-10-(2,6,6-trimethylcyclohexen-1-yl)deca-3,5,7,9-tetraen-2-one 390.2579 391.2624 —
P54788 17beta-Hydroxy-7alpha-methylandrost-4-en-3-one 302.2187 303.2265 —
P54790 Leucyl-Threonine 232.1438 233.1507 —
P54795 Foetisulfide A 224.0352 225.0433 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.09G167000 hypothetical protein NA 100
Glyma.09G210700 hypothetical protein AT1G31970:STRS1:DEA(D/H)-box RNA helicase family protein 100
Glyma.06G211800 hypothetical protein NA 99
Glyma.10G229600 hypothetical protein AT4G23630:BTI1:VIRB2-interacting protein 1 99
Glyma.10G257500 hypothetical protein NA 99
Glyma.12G007800 hypothetical protein NA 99
Glyma.18G252100 hypothetical protein AT1G02090:FUS5:Proteasome component (PCI) domain protein 99
Glyma.20G107000 hypothetical protein NA 99
Glyma.09G252400 hypothetical protein NA 98
Glyma.14G177100 hypothetical protein AT1G22450:COX6B:cytochrome C oxidase 6B 98