Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P28918 Trienomycin E 610.3503 611.3588 126
P29106 PGP(PGE2/22:5(7Z,10Z,13Z,16Z,19Z)) 972.4792 973.4887 126
P29714 Saframycin C 567.2128 568.2235 126
P30517 Ethambutol 204.1848 205.1925 126
P33934 1-(1-Phenylcyclohexyl)-4-hydroxypiperidine 259.1929 260.1990 126
P34061 p-Formylbenzoic acid 150.0310 151.0378 126
P34329 Rhopaladin B 370.1112 371.1158 126
P34873 (R)-2-Methylimino-1-phenylpropan-1-ol 163.0982 164.1054 126
P35765 Foetidissimoside A 1058.5215 1059.5351 126
P42290 446.1690 447.1777 126

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.04G220400 hypothetical protein AT5G10020:AT5G10020:Leucine-rich receptor-like protein kinase family protein 102
Glyma.07G093700 hypothetical protein AT3G18290:BTS:zinc finger protein-like protein 102
Glyma.10G037300 hypothetical protein AT3G54670:TTN8:Structural maintenance of chromosomes (SMC) family protein 102
Glyma.15G110200 hypothetical protein NA 102
Glyma.16G200500 hypothetical protein AT5G51840:AT5G51840:junctophilin-like protein 102
Glyma.20G217500 hypothetical protein AT5G41950:AT5G41950:Tetratricopeptide repeat (TPR)-like superfamily protein 102
Glyma.20G223300 hypothetical protein AT1G09770:CDC5:cell division cycle 5 102
Glyma.09G281400 hypothetical protein AT3G18620:AT3G18620:DHHC-type zinc finger family protein 101
Glyma.09G281700 hypothetical protein NA 101
Glyma.12G186400 hypothetical protein AT5G22350:ELM1:fission ELM1-like protein (DUF1022) 101