Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P39464 Arginylvaline 273.1778 274.1868 157
P46016 Lignan 238.1723 239.1780 157
P49105 Methyl camaralate 542.3555 543.3634 157
P50718 N-(9Z,12Z-octadecadienoyl)-taurine 387.2449 388.2513 157
P55581 Chlovalicin 332.1407 333.1480 157
P01915 Cardiospermin 275.0986 276.1051 156
P06888 Ethotoin 204.0868 205.0943 156
P08139 Goniolactone B 472.1526 473.1587 156
P12066 Sildenafil 474.2105 475.2149 156
P15974 Dihydro-3-methyl-2(3H)-furanone 100.0512 101.0588 156

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.02G294000 hypothetical protein NA 107
Glyma.08G111700 hypothetical protein NA 107
Glyma.11G184600 hypothetical protein AT4G08960:AT4G08960:phosphotyrosyl phosphatase activator (PTPA) family protein 107
Glyma.11G184900 hypothetical protein AT3G44530:HIRA:histone chaperone HIRA-like protein 107
Glyma.13G156200 hypothetical protein AT1G80710:DRS1:DROUGHT SENSITIVE 1 107
Glyma.20G108000 hypothetical protein NA 107
Glyma.03G041900 hypothetical protein NA 106
Glyma.16G063600 hypothetical protein NA 106
Glyma.02G294500 hypothetical protein AT5G50850:MAB1:Transketolase family protein 105
Glyma.04G107900 hypothetical protein AT3G53990:AT3G53990:Adenine nucleotide alpha hydrolases-like superfamily protein 105