Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55462 Schidigeragenin B 428.2908 429.2971 —
P55464 131.9595 132.9668 —
P55465 Medicagol 296.0316 297.0374 —
P55468 N-Desmethylzopiclone 374.0907 375.0977 —
P55469 Minwanensin 284.1634 285.1694 —
P55470 YM 47525 618.3033 619.3107 —
P55471 LysW-L-glutamyl 5-phosphate 356.0603 357.0673 —
P55474 Homoneoharringtonine 549.2443 550.2512 —
P55476 175.9825 176.9896 —
P55477 Ajugapantin A 550.2419 551.2490 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.02G294000 hypothetical protein NA 107
Glyma.08G111700 hypothetical protein NA 107
Glyma.11G184600 hypothetical protein AT4G08960:AT4G08960:phosphotyrosyl phosphatase activator (PTPA) family protein 107
Glyma.11G184900 hypothetical protein AT3G44530:HIRA:histone chaperone HIRA-like protein 107
Glyma.13G156200 hypothetical protein AT1G80710:DRS1:DROUGHT SENSITIVE 1 107
Glyma.20G108000 hypothetical protein NA 107
Glyma.03G041900 hypothetical protein NA 106
Glyma.16G063600 hypothetical protein NA 106
Glyma.02G294500 hypothetical protein AT5G50850:MAB1:Transketolase family protein 105
Glyma.04G107900 hypothetical protein AT3G53990:AT3G53990:Adenine nucleotide alpha hydrolases-like superfamily protein 105