Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P38997 Xanthobaccin B 512.2927 513.3014 113
P39126 Fruticosonine 312.2196 313.2285 113
P40099 Alanylproline 186.1024 187.1107 113
P42277 2beta-Hydroxytestosterone 304.2005 305.2076 113
P46449 Rapisterone 508.3341 509.3406 113
P51427 11E,14E-Octadecadienal 264.2418 265.2500 113
P55331 Juncin H 642.2343 643.2410 113
P55588 Hanburinone 626.2685 627.2796 113
P02264 Succinic anhydride 100.0157 101.0225 112
P03530 Thiamin monophosphate 344.0706 345.0792 112

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.02G294000 hypothetical protein NA 107
Glyma.08G111700 hypothetical protein NA 107
Glyma.11G184600 hypothetical protein AT4G08960:AT4G08960:phosphotyrosyl phosphatase activator (PTPA) family protein 107
Glyma.11G184900 hypothetical protein AT3G44530:HIRA:histone chaperone HIRA-like protein 107
Glyma.13G156200 hypothetical protein AT1G80710:DRS1:DROUGHT SENSITIVE 1 107
Glyma.20G108000 hypothetical protein NA 107
Glyma.03G041900 hypothetical protein NA 106
Glyma.16G063600 hypothetical protein NA 106
Glyma.02G294500 hypothetical protein AT5G50850:MAB1:Transketolase family protein 105
Glyma.04G107900 hypothetical protein AT3G53990:AT3G53990:Adenine nucleotide alpha hydrolases-like superfamily protein 105