Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P48358 ES-242-3 620.2242 621.2329 135
P48426 N-Stearoyl Aspartic acid 399.2929 400.3001 135
P51638 Dihydroisomorphine-6-glucuronide 463.1841 464.1922 135
P00007 488.7949 489.8019 134
P00391 Diethylthiophosphoric acid 170.0189 171.0268 134
P00835 Peneciraistin C 398.1573 399.1636 134
P00877 Lupinic acid 183.1238 184.1307 134
P02924 162.9316 163.9388 134
P05065 N-(35-hydroxy-pentatriacontanoyl)-sphing-4-enine 819.8070 820.8156 134
P06122 769.2075 770.2110 134

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.05G183100 hypothetical protein AT5G64940:ATH13:ABC2 homolog 13 110
Glyma.09G056900 hypothetical protein NA 110
Glyma.18G226300 hypothetical protein NA 110
Glyma.08G150000 hypothetical protein AT2G32850:AT2G32850:Protein kinase superfamily protein 109
Glyma.15G107800 hypothetical protein AT1G64570:DUO3:Homeodomain-like superfamily protein 109
Glyma.18G107900 hypothetical protein AT1G06490:CalS7:glucan synthase-like 7 109
Glyma.18G231300 hypothetical protein AT3G61310:AT3G61310:AT hook motif DNA-binding family protein 109
Glyma.03G035800 hypothetical protein NA 108
Glyma.16G072000 hypothetical protein AT1G52800:AT1G52800:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 108
Glyma.20G107900 hypothetical protein NA 108