Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P22734 Apigenosylide A 858.3447 859.3527 142
P32552 Briaexcavatolide N 480.1962 481.2002 142
P43465 907.9905 908.9925 142
P44266 Tylosin B 771.4372 772.4436 142
P53116 243.8782 244.8856 142
P04648 (5S)-5-(7-Benzofuranyl)-8-chloro-3-methyl-1,2,4,5-tetrahydro-3-benzazepin-7-ol 327.1057 328.1121 141
P05425 Flucythrinate 451.1546 452.1637 141
P06073 Indol-3-ylacetyl-myo-inositol L-arabinoside 469.1542 470.1624 141
P07929 Glycozolone A 252.1271 253.1325 141
P09365 Leucyl-Aspartate 246.1187 247.1238 141

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.05G183100 hypothetical protein AT5G64940:ATH13:ABC2 homolog 13 110
Glyma.09G056900 hypothetical protein NA 110
Glyma.18G226300 hypothetical protein NA 110
Glyma.08G150000 hypothetical protein AT2G32850:AT2G32850:Protein kinase superfamily protein 109
Glyma.15G107800 hypothetical protein AT1G64570:DUO3:Homeodomain-like superfamily protein 109
Glyma.18G107900 hypothetical protein AT1G06490:CalS7:glucan synthase-like 7 109
Glyma.18G231300 hypothetical protein AT3G61310:AT3G61310:AT hook motif DNA-binding family protein 109
Glyma.03G035800 hypothetical protein NA 108
Glyma.16G072000 hypothetical protein AT1G52800:AT1G52800:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 108
Glyma.20G107900 hypothetical protein NA 108