Soybean mGWAS DB
Explore metabolite–gene associations from soybean metabolome GWAS results.
This database supports bidirectional navigation between metabolites and genes,
with linked detail pages for association evidence and mass-based compound candidates.
SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.
Explore by Metabolite
Search metabolites by metabolite ID or candidate names, formulas or compound IDs.
| Metabolite ID | Candidate annotation | Deionized mass (Da) | Average m/z | Associated genes (overlap) |
|---|---|---|---|---|
| P17052 | 2-Methyl-1-hydroxypropyl-ThPP | 496.0998 | 497.1050 | 156 |
| P28722 | 3-tridecylphenol | 276.2419 | 277.2495 | 156 |
| P34725 | Cyanidin 3-(6'',6'''-disinapylsophoroside)-5-glucoside | 1184.3199 | 593.1654 | 156 |
| P35908 | N-(15-methyl-hexadecanoyl) glycine | 327.2801 | 328.2882 | 156 |
| P41319 | Veralosine | 617.3970 | 618.4034 | 156 |
| P41580 | 130.9653 | 131.9723 | 156 | |
| P47930 | PS(24:0/16:0) | 847.6377 | 848.6450 | 156 |
| P55336 | 283.2761 | 284.2819 | 156 | |
| P03955 | Methylfurfuryl alcohol | 112.0518 | 113.0589 | 155 |
| P09728 | 282.1536 | 283.1610 | 155 |
Explore by Gene
Search genes by gene ID, alias, description, or Arabidopsis ortholog information.
| Gene ID | Alias | Description | Arabidopsis ortholog | Associated metabolites (overlap) |
|---|---|---|---|---|
| Glyma.05G183100 | hypothetical protein | AT5G64940:ATH13:ABC2 homolog 13 | 110 | |
| Glyma.09G056900 | hypothetical protein | NA | 110 | |
| Glyma.18G226300 | hypothetical protein | NA | 110 | |
| Glyma.08G150000 | hypothetical protein | AT2G32850:AT2G32850:Protein kinase superfamily protein | 109 | |
| Glyma.15G107800 | hypothetical protein | AT1G64570:DUO3:Homeodomain-like superfamily protein | 109 | |
| Glyma.18G107900 | hypothetical protein | AT1G06490:CalS7:glucan synthase-like 7 | 109 | |
| Glyma.18G231300 | hypothetical protein | AT3G61310:AT3G61310:AT hook motif DNA-binding family protein | 109 | |
| Glyma.03G035800 | hypothetical protein | NA | 108 | |
| Glyma.16G072000 | hypothetical protein | AT1G52800:AT1G52800:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | 108 | |
| Glyma.20G107900 | hypothetical protein | NA | 108 |