Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55291 (+)-Pyripyropene A 583.2480 584.2538 —
P55292 609.7012 610.7065 —
P55293 352.6007 353.6073 —
P55297 Triptregeline A 669.2503 670.2541 —
P55298 7-O-Methyl-N-deacetylipecoside 535.2337 536.2405 —
P55301 2-((2-Methoxy-2-(3-(trifluoromethyl)phenyl)ethyl)amino)ethyl 4-(2-(2-(9H-fluoren-9-yl)acetamido)ethyl)benzoate 616.2553 617.2592 —
P55303 16-Hydroxymilolide G 626.2577 627.2664 —
P55305 Pyronine Y 266.1428 267.1514 —
P55308 609.0335 610.0387 —
P55320 627.2615 628.2696 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.05G183100 hypothetical protein AT5G64940:ATH13:ABC2 homolog 13 110
Glyma.09G056900 hypothetical protein NA 110
Glyma.18G226300 hypothetical protein NA 110
Glyma.08G150000 hypothetical protein AT2G32850:AT2G32850:Protein kinase superfamily protein 109
Glyma.15G107800 hypothetical protein AT1G64570:DUO3:Homeodomain-like superfamily protein 109
Glyma.18G107900 hypothetical protein AT1G06490:CalS7:glucan synthase-like 7 109
Glyma.18G231300 hypothetical protein AT3G61310:AT3G61310:AT hook motif DNA-binding family protein 109
Glyma.03G035800 hypothetical protein NA 108
Glyma.16G072000 hypothetical protein AT1G52800:AT1G52800:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 108
Glyma.20G107900 hypothetical protein NA 108