Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P34357 1-Acetyl-3-carboxy-tetrahydro-beta-carboline 258.0998 259.1059 134
P34381 3beta-sulfooxy-7beta-N-acetylglucosaminyl-5-cholen-24-oyl glycine 730.3366 731.3411 134
P37678 (-)-2,3-Dihydrocitromycetin 292.0572 293.0640 134
P42697 Formononetin 7-O-(6''-acetylglcoside) 472.1391 473.1469 134
P51957 Dovyalicin E 379.2204 380.2286 134
P55306 1-O-(2-methoxy-hexadecyl)-sn-glycerol 346.3034 347.3118 134
P03988 189.0592 190.0680 133
P07033 AICAR 338.0620 339.0683 133
P08028 Fipexide 388.1183 389.1270 133
P17685 Beta-Casomorphin-5 579.2640 580.2711 133

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.08G338200 hypothetical protein NA 112
Glyma.08G338600 hypothetical protein NA 112
Glyma.09G272300 hypothetical protein AT5G01950:AT5G01950:Leucine-rich repeat protein kinase family protein 112
Glyma.09G272800 hypothetical protein AT3G08670:AT3G08670:serine/arginine repetitive matrix-like protein 112
Glyma.16G111200 hypothetical protein AT5G65930:ZWI:kinesin-like calmodulin-binding protein (ZWICHEL) 112
Glyma.11G062400 hypothetical protein AT4G36860:AT4G36860:LIM domain-containing protein 111
Glyma.02G151500 hypothetical protein AT2G47990:SWA1:transducin family protein / WD-40 repeat family protein 110
Glyma.02G294900 hypothetical protein AT5G55220:AT5G55220:trigger factor type chaperone family protein 110
Glyma.02G295000 hypothetical protein AT4G26770:AT4G26770:Phosphatidate cytidylyltransferase family protein 110
Glyma.05G182900 hypothetical protein NA 110