Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P11739 THF-L-glutamate 574.2136 575.2230 144
P11990 Methyl 18-bromo-5,6-trans-endomethylene-7,11,15-trimethyl-8E,10Z-octadecadien-17-ynoate 422.1803 423.1876 144
P15141 N-(2-Methylbutyl)-2E-undecene-8,10-diynamide 245.1779 246.1853 144
P15383 (7R)-7-(5-Carboxy-5-oxopentanoyl)aminocephalosporinate 414.0740 415.0813 144
P23163 Urdamycinone F 504.1630 505.1692 144
P23229 Isariotin E 377.2268 378.2342 144
P24964 1066.3562 1067.3588 144
P27877 Pinocembrin 7-O-neohesperidoside 3'''-O-acetate 606.1949 607.2039 144
P33592 521.2494 522.2539 144
P34785 4'-(beta-D-Glucopyranosyloxy)-7',8'-dihydro-4,4'-diapo-psi,psi-caroten-4-oic acid 608.3368 609.3435 144

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.08G338200 hypothetical protein NA 112
Glyma.08G338600 hypothetical protein NA 112
Glyma.09G272300 hypothetical protein AT5G01950:AT5G01950:Leucine-rich repeat protein kinase family protein 112
Glyma.09G272800 hypothetical protein AT3G08670:AT3G08670:serine/arginine repetitive matrix-like protein 112
Glyma.16G111200 hypothetical protein AT5G65930:ZWI:kinesin-like calmodulin-binding protein (ZWICHEL) 112
Glyma.11G062400 hypothetical protein AT4G36860:AT4G36860:LIM domain-containing protein 111
Glyma.02G151500 hypothetical protein AT2G47990:SWA1:transducin family protein / WD-40 repeat family protein 110
Glyma.02G294900 hypothetical protein AT5G55220:AT5G55220:trigger factor type chaperone family protein 110
Glyma.02G295000 hypothetical protein AT4G26770:AT4G26770:Phosphatidate cytidylyltransferase family protein 110
Glyma.05G182900 hypothetical protein NA 110