Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55021 Tetracenomycin C 472.1013 473.1074 —
P55022 SR 12813 504.2425 505.2504 —
P55026 8-[(2R,3S)-3-(8-Hydroxyoctyl)oxiran-2-yl]octanoylcarnitine 457.3382 458.3473 —
P55028 2,6-Diamino-9-(2-hydroxyethoxymethyl)purine 224.1034 225.1102 —
P55032 {4-[2-Acetylamino-2-(1-biphenyl-4-ylmethyl-2-oxo-azepan-3-ylcarbamoyl)-ethyl]-2-phosphono-phenoxy}-acetic acid 637.2216 638.2342 —
P55037 Commodore 449.0956 450.1062 —
P55043 Sumarotene 382.1962 383.2035 —
P55044 Phthalic anhydride 148.0148 149.0220 —
P55045 1'-Carboxy-chondrochloren A 571.2569 572.2623 —
P55046 Saligcinnamide 490.3909 491.3987 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.08G338200 hypothetical protein NA 112
Glyma.08G338600 hypothetical protein NA 112
Glyma.09G272300 hypothetical protein AT5G01950:AT5G01950:Leucine-rich repeat protein kinase family protein 112
Glyma.09G272800 hypothetical protein AT3G08670:AT3G08670:serine/arginine repetitive matrix-like protein 112
Glyma.16G111200 hypothetical protein AT5G65930:ZWI:kinesin-like calmodulin-binding protein (ZWICHEL) 112
Glyma.11G062400 hypothetical protein AT4G36860:AT4G36860:LIM domain-containing protein 111
Glyma.02G151500 hypothetical protein AT2G47990:SWA1:transducin family protein / WD-40 repeat family protein 110
Glyma.02G294900 hypothetical protein AT5G55220:AT5G55220:trigger factor type chaperone family protein 110
Glyma.02G295000 hypothetical protein AT4G26770:AT4G26770:Phosphatidate cytidylyltransferase family protein 110
Glyma.05G182900 hypothetical protein NA 110