Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54970 389.7484 390.7567 —
P54972 3-O-Methyltithonin 394.1983 395.2085 —
P54975 504.3587 505.3668 —
P54977 Norbixin 380.1978 381.2047 —
P54980 2-Nitrophenyl a-D-galactopyranoside 301.0744 302.0796 —
P54981 N-(11Z,14Z-eicosadienoyl)-ethanolamine 351.3110 352.3178 —
P54985 209.1111 210.1189 —
P54990 517.3724 518.3802 —
P54992 16-(3,6-dideoxy-alpha-L-arabino-hexopyranosyloxy)-2E-hexadecenoic acid 400.2767 401.2836 —
P54993 Phenol, 2-(2H-benzotriazol-2-yl)-4,6-bis(1,1-dimethylpropyl)- 351.2316 352.2396 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.08G338200 hypothetical protein NA 112
Glyma.08G338600 hypothetical protein NA 112
Glyma.09G272300 hypothetical protein AT5G01950:AT5G01950:Leucine-rich repeat protein kinase family protein 112
Glyma.09G272800 hypothetical protein AT3G08670:AT3G08670:serine/arginine repetitive matrix-like protein 112
Glyma.16G111200 hypothetical protein AT5G65930:ZWI:kinesin-like calmodulin-binding protein (ZWICHEL) 112
Glyma.11G062400 hypothetical protein AT4G36860:AT4G36860:LIM domain-containing protein 111
Glyma.02G151500 hypothetical protein AT2G47990:SWA1:transducin family protein / WD-40 repeat family protein 110
Glyma.02G294900 hypothetical protein AT5G55220:AT5G55220:trigger factor type chaperone family protein 110
Glyma.02G295000 hypothetical protein AT4G26770:AT4G26770:Phosphatidate cytidylyltransferase family protein 110
Glyma.05G182900 hypothetical protein NA 110