Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54455 789.0907 790.0952 —
P54456 Darexaban glucuronide 650.2594 651.2677 —
P54462 617.4159 618.4227 —
P54463 316.8012 317.8087 —
P54465 Pentenylbenzene 146.1082 147.1157 —
P54466 (-)-4,6'-Anhydrooxysporidinone 471.3016 472.3077 —
P54467 201.1586 202.1666 —
P54468 31-Hydroxy rifabutin 862.4276 432.2210 —
P54470 Alogliptin 339.1719 340.1772 —
P54473 Tiegusanin E 650.2722 651.2779 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.10G079100 hypothetical protein NA 1,935
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family__AT2G35960:NHL12:NDR1/HIN1-like 12 1,935
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1,935
Glyma.09G080200 hypothetical protein NA 1,860
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1,840
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1,835
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1,835
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1,811
Glyma.03G177700 hypothetical protein NA 1,797
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1,774