Soybean mGWAS DB
Explore metabolite–gene associations from soybean metabolome GWAS results.
This database supports bidirectional navigation between metabolites and genes,
with linked detail pages for association evidence and mass-based compound candidates.
SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.
Explore by Metabolite
Search metabolites by metabolite ID or candidate names, formulas or compound IDs.
| Metabolite ID | Candidate annotation | Deionized mass (Da) | Average m/z | Associated genes (overlap) |
|---|---|---|---|---|
| P38571 | Madecassoside | 974.5044 | 975.5100 | 103 |
| P39613 | Carboxymethyl chitosan | 543.2297 | 544.2379 | 103 |
| P39803 | 2,3,4,5-tetranor-9S,11R,15S-trihydroxy-13E-prostenoic acid | 300.1905 | 301.1987 | 103 |
| P40626 | CDP-DG(i-18:0/18:2(9Z,11Z)) | 1005.5541 | 1006.5567 | 103 |
| P41044 | Hicksoane B | 482.1184 | 483.1260 | 103 |
| P41403 | Levetiracetam | 170.1061 | 171.1136 | 103 |
| P42139 | Alloeremophilone | 218.1653 | 437.3391 | 103 |
| P43927 | 649.4107 | 650.4226 | 103 | |
| P49594 | (+)-Mecambroline | 295.1231 | 296.1302 | 103 |
| P50391 | Rubescensin M | 682.4118 | 683.4174 | 103 |
Explore by Gene
Search genes by gene ID, alias, description, or Arabidopsis ortholog information.
| Gene ID | Alias | Description | Arabidopsis ortholog | Associated metabolites (overlap) |
|---|---|---|---|---|
| Glyma.10G079100 | hypothetical protein | NA | 1,935 | |
| Glyma.10G080000 | hypothetical protein | AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family__AT2G35960:NHL12:NDR1/HIN1-like 12 | 1,935 | |
| Glyma.16G210400 | hypothetical protein | AT1G73350:AT1G73350:ankyrin repeat protein | 1,935 | |
| Glyma.09G080200 | hypothetical protein | NA | 1,860 | |
| Glyma.06G112700 | hypothetical protein | AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein | 1,840 | |
| Glyma.06G112300 | hypothetical protein | AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase | 1,835 | |
| Glyma.06G112600 | hypothetical protein | AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein | 1,835 | |
| Glyma.09G282900 | hypothetical protein | AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 | 1,811 | |
| Glyma.03G177700 | hypothetical protein | NA | 1,797 | |
| Glyma.07G015700 | hypothetical protein | AT1G79750:NADP-ME4:NADP-malic enzyme 4 | 1,774 |