Soybean mGWAS DB
Explore metabolite–gene associations from soybean metabolome GWAS results.
This database supports bidirectional navigation between metabolites and genes,
with linked detail pages for association evidence and mass-based compound candidates.
SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.
Explore by Metabolite
Search metabolites by metabolite ID or candidate names, formulas or compound IDs.
| Metabolite ID | Candidate annotation | Deionized mass (Da) | Average m/z | Associated genes (overlap) |
|---|---|---|---|---|
| P02811 | 278.9789 | 279.9860 | 107 | |
| P05287 | 6-Hydroxymethyl-7,8-dihydropterin diphosphate | 355.0086 | 356.0170 | 107 |
| P05506 | N-(3-oxo-butanoyl)-homoserine lactone | 185.0673 | 186.0750 | 107 |
| P06857 | 2-Methylthioribosyl-trans-zeatin | 397.1422 | 398.1494 | 107 |
| P06919 | 125.5465 | 126.5535 | 107 | |
| P07892 | Sesamol | 138.0308 | 139.0378 | 107 |
| P08317 | Pyrrolidin-1-yl N,N-bis(sulfanyl)carbamate | 194.0198 | 195.0271 | 107 |
| P08740 | Sulfisomidine | 278.0837 | 279.0911 | 107 |
| P10800 | RA V | 756.3531 | 757.3596 | 107 |
| P11580 | Aristolindiquinone | 218.0590 | 219.0664 | 107 |
Explore by Gene
Search genes by gene ID, alias, description, or Arabidopsis ortholog information.
| Gene ID | Alias | Description | Arabidopsis ortholog | Associated metabolites (overlap) |
|---|---|---|---|---|
| Glyma.10G079100 | hypothetical protein | NA | 1,935 | |
| Glyma.10G080000 | hypothetical protein | AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family__AT2G35960:NHL12:NDR1/HIN1-like 12 | 1,935 | |
| Glyma.16G210400 | hypothetical protein | AT1G73350:AT1G73350:ankyrin repeat protein | 1,935 | |
| Glyma.09G080200 | hypothetical protein | NA | 1,860 | |
| Glyma.06G112700 | hypothetical protein | AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein | 1,840 | |
| Glyma.06G112300 | hypothetical protein | AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase | 1,835 | |
| Glyma.06G112600 | hypothetical protein | AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein | 1,835 | |
| Glyma.09G282900 | hypothetical protein | AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 | 1,811 | |
| Glyma.03G177700 | hypothetical protein | NA | 1,797 | |
| Glyma.07G015700 | hypothetical protein | AT1G79750:NADP-ME4:NADP-malic enzyme 4 | 1,774 |