Soybean mGWAS DB
Explore metabolite–gene associations from soybean metabolome GWAS results.
This database supports bidirectional navigation between metabolites and genes,
with linked detail pages for association evidence and mass-based compound candidates.
SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.
Explore by Metabolite
Search metabolites by metabolite ID or candidate names, formulas or compound IDs.
| Metabolite ID | Candidate annotation | Deionized mass (Da) | Average m/z | Associated genes (overlap) |
|---|---|---|---|---|
| P39157 | 2-Cyanomethylene-1-glucosyloxy-3-hydroxy-4,5-dimethoxycyclohexane | 375.1531 | 376.1603 | 124 |
| P40011 | Caledonixanthone B | 278.0952 | 279.1011 | 124 |
| P42908 | 1047.0463 | 1048.0559 | 124 | |
| P44929 | Pemigatinib | 487.2058 | 488.2132 | 124 |
| P47805 | 3''-Adenylylspectinomycin | 661.2071 | 662.2127 | 124 |
| P49409 | 2,4-Diamino-6-dimethylamino-1,3,5-triazine | 154.0974 | 155.1054 | 124 |
| P52404 | 879.3783 | 880.3854 | 124 | |
| P52519 | Glyinflanin J | 390.1798 | 391.1850 | 124 |
| P53245 | 258.8909 | 259.8968 | 124 | |
| P09432 | Metronidazole benzoate | 275.0895 | 276.0962 | 123 |
Explore by Gene
Search genes by gene ID, alias, description, or Arabidopsis ortholog information.
| Gene ID | Alias | Description | Arabidopsis ortholog | Associated metabolites (overlap) |
|---|---|---|---|---|
| Glyma.10G079100 | hypothetical protein | NA | 1,935 | |
| Glyma.10G080000 | hypothetical protein | AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family__AT2G35960:NHL12:NDR1/HIN1-like 12 | 1,935 | |
| Glyma.16G210400 | hypothetical protein | AT1G73350:AT1G73350:ankyrin repeat protein | 1,935 | |
| Glyma.09G080200 | hypothetical protein | NA | 1,860 | |
| Glyma.06G112700 | hypothetical protein | AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein | 1,840 | |
| Glyma.06G112300 | hypothetical protein | AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase | 1,835 | |
| Glyma.06G112600 | hypothetical protein | AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein | 1,835 | |
| Glyma.09G282900 | hypothetical protein | AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 | 1,811 | |
| Glyma.03G177700 | hypothetical protein | NA | 1,797 | |
| Glyma.07G015700 | hypothetical protein | AT1G79750:NADP-ME4:NADP-malic enzyme 4 | 1,774 |