Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P48358 ES-242-3 620.2242 621.2329 135
P48426 N-Stearoyl Aspartic acid 399.2929 400.3001 135
P51638 Dihydroisomorphine-6-glucuronide 463.1841 464.1922 135
P00007 488.7949 489.8019 134
P00391 Diethylthiophosphoric acid 170.0189 171.0268 134
P00835 Peneciraistin C 398.1573 399.1636 134
P00877 Lupinic acid 183.1238 184.1307 134
P02924 162.9316 163.9388 134
P05065 N-(35-hydroxy-pentatriacontanoyl)-sphing-4-enine 819.8070 820.8156 134
P06122 769.2075 770.2110 134

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G108700 hypothetical protein AT1G09290:AT1G09290:uncharacterized protein 115
Glyma.07G078900 hypothetical protein AT3G61080:AT3G61080:Protein kinase superfamily protein 114
Glyma.14G208600 hypothetical protein NA 114
Glyma.14G208700 hypothetical protein NA 114
Glyma.14G209200 hypothetical protein NA 114
Glyma.14G209600 hypothetical protein NA 114
Glyma.18G260700 hypothetical protein NA 114
Glyma.01G231400 hypothetical protein AT4G25340:FKBP53:FK506 BINDING PROTEIN 53 113
Glyma.08G113900 hypothetical protein AT3G13560:AT3G13560:O-Glycosyl hydrolases family 17 protein 113
Glyma.03G041800 hypothetical protein NA 112