Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P11739 THF-L-glutamate 574.2136 575.2230 144
P11990 Methyl 18-bromo-5,6-trans-endomethylene-7,11,15-trimethyl-8E,10Z-octadecadien-17-ynoate 422.1803 423.1876 144
P15141 N-(2-Methylbutyl)-2E-undecene-8,10-diynamide 245.1779 246.1853 144
P15383 (7R)-7-(5-Carboxy-5-oxopentanoyl)aminocephalosporinate 414.0740 415.0813 144
P23163 Urdamycinone F 504.1630 505.1692 144
P23229 Isariotin E 377.2268 378.2342 144
P24964 1066.3562 1067.3588 144
P27877 Pinocembrin 7-O-neohesperidoside 3'''-O-acetate 606.1949 607.2039 144
P33592 521.2494 522.2539 144
P34785 4'-(beta-D-Glucopyranosyloxy)-7',8'-dihydro-4,4'-diapo-psi,psi-caroten-4-oic acid 608.3368 609.3435 144

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G108700 hypothetical protein AT1G09290:AT1G09290:uncharacterized protein 115
Glyma.07G078900 hypothetical protein AT3G61080:AT3G61080:Protein kinase superfamily protein 114
Glyma.14G208600 hypothetical protein NA 114
Glyma.14G208700 hypothetical protein NA 114
Glyma.14G209200 hypothetical protein NA 114
Glyma.14G209600 hypothetical protein NA 114
Glyma.18G260700 hypothetical protein NA 114
Glyma.01G231400 hypothetical protein AT4G25340:FKBP53:FK506 BINDING PROTEIN 53 113
Glyma.08G113900 hypothetical protein AT3G13560:AT3G13560:O-Glycosyl hydrolases family 17 protein 113
Glyma.03G041800 hypothetical protein NA 112