Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P00823	(-)-Mintlactone	306.0213	307.0281	164
P07492	Polypropylene glycol (m w 1,200-3,000)	134.0949	135.1012	164
P10281	Undeca-2,4,6-trienedioyl-CoA	959.2076	960.2157	164
P15662		513.2875	514.2951	164
P18935	Marchantin P	438.1840	439.1899	164
P22654	Excavatolide D	524.2197	525.2274	164
P32650	Thonzylamine	286.1756	287.1822	164
P34351	Arginylglutamine	302.1710	605.3489	164
P48467	13-Apo-beta-carotenone	258.1964	259.2031	164
P01110	(R)-11,12,13-Trinor-1(5),6,9-guaiatrien-8-one	174.1043	175.1111	163

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog	Associated metabolites (overlap)
Glyma.20G108700	hypothetical protein	AT1G09290:AT1G09290:uncharacterized protein	115
Glyma.07G078900	hypothetical protein	AT3G61080:AT3G61080:Protein kinase superfamily protein	114
Glyma.14G208600	hypothetical protein	NA	114
Glyma.14G208700	hypothetical protein	NA	114
Glyma.14G209200	hypothetical protein	NA	114
Glyma.14G209600	hypothetical protein	NA	114
Glyma.18G260700	hypothetical protein	NA	114
Glyma.01G231400	hypothetical protein	AT4G25340:FKBP53:FK506 BINDING PROTEIN 53	113
Glyma.08G113900	hypothetical protein	AT3G13560:AT3G13560:O-Glycosyl hydrolases family 17 protein	113
Glyma.03G041800	hypothetical protein	NA	112