Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P40016 Avermectin B1b 858.4721 859.4824 172
P41635 CDP-DG(22:6(4Z,7Z,10Z,12E,16Z,19Z)-OH(14)/i-19:0) 1083.5609 1084.5672 172
P43604 10-ethoxy-2methylene-10-oxodecanoic acid 242.1481 243.1568 172
P44158 (3-Methyl-2-butenyl)-benzene 146.1085 147.1159 172
P17040 L-Arginine phosphate 254.0761 255.0845 171
P18481 Eugenetin 220.0742 221.0801 171
P24176 (R)-2-Methylimino-1-phenylpropan-1-ol 163.1025 164.1104 171
P42932 1798.9760 900.5001 171
P50359 Decarbamoylneosaxitoxin 272.1221 273.1277 171
P01939 (2-Ethylcrotonoyl)urea 156.0876 157.0950 170

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G108700 hypothetical protein AT1G09290:AT1G09290:uncharacterized protein 115
Glyma.07G078900 hypothetical protein AT3G61080:AT3G61080:Protein kinase superfamily protein 114
Glyma.14G208600 hypothetical protein NA 114
Glyma.14G208700 hypothetical protein NA 114
Glyma.14G209200 hypothetical protein NA 114
Glyma.14G209600 hypothetical protein NA 114
Glyma.18G260700 hypothetical protein NA 114
Glyma.01G231400 hypothetical protein AT4G25340:FKBP53:FK506 BINDING PROTEIN 53 113
Glyma.08G113900 hypothetical protein AT3G13560:AT3G13560:O-Glycosyl hydrolases family 17 protein 113
Glyma.03G041800 hypothetical protein NA 112