Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P00788	Tyrphostin B42	294.0991	295.1079	199
P07827		809.2516	810.2565	199
P14487	Yuzurimine E	429.2528	430.2610	199
P42503		121.9563	122.9631	199
P50354	Nodulisporic acid C2	701.4348	702.4409	199
P54402	Catuabine E	371.1815	372.1888	199
P26744	FR901537	507.1481	508.1541	198
P04642	Aminoacylase	536.2172	537.2249	197
P15145	Geodiamolide M	609.2125	610.2230	197
P33997		615.3757	616.3848	197

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog	Associated metabolites (overlap)
Glyma.20G108700	hypothetical protein	AT1G09290:AT1G09290:uncharacterized protein	115
Glyma.07G078900	hypothetical protein	AT3G61080:AT3G61080:Protein kinase superfamily protein	114
Glyma.14G208600	hypothetical protein	NA	114
Glyma.14G208700	hypothetical protein	NA	114
Glyma.14G209200	hypothetical protein	NA	114
Glyma.14G209600	hypothetical protein	NA	114
Glyma.18G260700	hypothetical protein	NA	114
Glyma.01G231400	hypothetical protein	AT4G25340:FKBP53:FK506 BINDING PROTEIN 53	113
Glyma.08G113900	hypothetical protein	AT3G13560:AT3G13560:O-Glycosyl hydrolases family 17 protein	113
Glyma.03G041800	hypothetical protein	NA	112