Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P49283 1-[Fluoro(methoxy)phosphoryl]oxyicosa-5,8,11,14-tetraene 386.2397 387.2485 116
P52469 1-nonadecene-2,3R-dicarboxylic acid 354.2722 355.2780 116
P54014 N-Docosahexaenoyl Serine 415.2716 416.2775 116
P03881 1-Phenyl-1-cyclohexene 158.1087 159.1169 115
P03884 (2R,3R,4S,5R)-2-(Hydroxymethyl)-6-[(3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxane-3,4,5-triol 326.1201 327.1263 115
P10074 Tamoxifen-N-glucuronide 547.2601 548.2664 115
P10859 Chlorhexidine 504.2037 505.2120 115
P11915 7-Oxostaurosporine 480.1801 481.1828 115
P15144 1-(4-Hydroxy-3,5-dimethoxyphenyl)-7-(4-hydroxy-3-methoxyphenyl)-3,5-heptanediol 406.1990 407.2051 115
P15201 Ternatoside D 611.2191 612.2258 115

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G108700 hypothetical protein AT1G09290:AT1G09290:uncharacterized protein 115
Glyma.07G078900 hypothetical protein AT3G61080:AT3G61080:Protein kinase superfamily protein 114
Glyma.14G208600 hypothetical protein NA 114
Glyma.14G208700 hypothetical protein NA 114
Glyma.14G209200 hypothetical protein NA 114
Glyma.14G209600 hypothetical protein NA 114
Glyma.18G260700 hypothetical protein NA 114
Glyma.01G231400 hypothetical protein AT4G25340:FKBP53:FK506 BINDING PROTEIN 53 113
Glyma.08G113900 hypothetical protein AT3G13560:AT3G13560:O-Glycosyl hydrolases family 17 protein 113
Glyma.03G041800 hypothetical protein NA 112