Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P24140 Aristolindiquinone 218.0573 219.0638 183
P29594 Butanoic acid, 3-((2-naphthalenylsulfonyl)amino)-4-oxo-4-((2-phenylethyl)amino)-, (S)- 426.1242 427.1313 183
P36026 O-Phosphoviomycin 765.2885 766.2977 183
P37799 4-pregnene-17alpha,20beta,21-triol-3,11-dione 362.2054 363.2127 183
P38116 Leuphasyl 569.2841 570.2907 183
P39693 4-[2-Acetylamino-2-(1-biphenyl-4-ylmethyl-2-oxo-azepan-3-ylcarbamoyl)-ethyl]-2-formyl-benzoic acid 555.2408 556.2481 183
P44241 Avermectin A2a monosaccharide 760.4380 761.4431 183
P46117 (S)-3-(6-Methoxypyridin-3-yl)-3-(2-oxo-3-(3-(5,6,7,8-tetrahydro-1,8-naphthyridin-2-yl)propyl)imidazolidin-1-yl)propanoic acid 439.2225 440.2339 183
P46875 2-Ethylhexyl 4-(dimethylamino)benzoate 277.2077 278.2165 183
P00749 4(3H)-Quinazolinone, 2-ethyl-3-(o-tolyl)- 264.1257 265.1335 182

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.10G082200 hypothetical protein NA 119
Glyma.13G134000 hypothetical protein NA 119
Glyma.17G137100 hypothetical protein AT4G22860:AT4G22860:Cell cycle regulated microtubule associated protein 119
Glyma.18G266200 hypothetical protein NA 119
Glyma.09G062200 hypothetical protein AT2G19350:AT2G19350:transmembrane protein (DUF872) 118
Glyma.12G193800 hypothetical protein AT2G05710:ACO3:aconitase 3 118
Glyma.13G319600 hypothetical protein AT5G22740:CSLA02:cellulose synthase-like A02 118
Glyma.18G044900 hypothetical protein AT1G66120:AAE11:AMP-dependent synthetase and ligase family protein__AT1G68270:AT1G68270:AMP-dependent synthetase and ligase family protein 118
Glyma.20G022500 hypothetical protein NA 117
Glyma.08G182400 hypothetical protein NA 116