Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P24035 944.3487 945.3559 115
P31486 Mangostenone B 462.2048 463.2128 115
P33548 4,6,7-Trihydroxy-1,2,3,4-tetrahydroisoquinoline 181.0730 182.0796 115
P34212 N-succinyl-chitosan 583.2266 584.2365 115
P35073 105.0291 106.0364 115
P38388 2,2'-Azobis(2-amidinopropane) 198.1599 199.1664 115
P39278 Maoecrystal T 490.2499 491.2605 115
P39415 2,2-Dimethyl-N-(2,4,6-trimethoxyphenyl)dodecanamide 393.2865 394.2914 115
P40332 366.7200 367.7293 115
P41801 Fomidacillin 592.1682 593.1721 115

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.10G082200 hypothetical protein NA 119
Glyma.13G134000 hypothetical protein NA 119
Glyma.17G137100 hypothetical protein AT4G22860:AT4G22860:Cell cycle regulated microtubule associated protein 119
Glyma.18G266200 hypothetical protein NA 119
Glyma.09G062200 hypothetical protein AT2G19350:AT2G19350:transmembrane protein (DUF872) 118
Glyma.12G193800 hypothetical protein AT2G05710:ACO3:aconitase 3 118
Glyma.13G319600 hypothetical protein AT5G22740:CSLA02:cellulose synthase-like A02 118
Glyma.18G044900 hypothetical protein AT1G66120:AAE11:AMP-dependent synthetase and ligase family protein__AT1G68270:AT1G68270:AMP-dependent synthetase and ligase family protein 118
Glyma.20G022500 hypothetical protein NA 117
Glyma.08G182400 hypothetical protein NA 116