Soybean mGWAS DB
Explore metabolite–gene associations from soybean metabolome GWAS results.
This database supports bidirectional navigation between metabolites and genes,
with linked detail pages for association evidence and mass-based compound candidates.
SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.
Explore by Metabolite
Search metabolites by metabolite ID or candidate names, formulas or compound IDs.
| Metabolite ID | Candidate annotation | Deionized mass (Da) | Average m/z | Associated genes (overlap) |
|---|---|---|---|---|
| P34102 | 4,4,6,6-Tetramethyl-bicyclo[3.1.0]hex-2-ene | 136.1242 | 273.2557 | 131 |
| P34777 | 311.2896 | 312.2966 | 131 | |
| P36124 | Lusitanicoside | 442.1820 | 443.1889 | 131 |
| P38167 | 470.7163 | 471.7226 | 131 | |
| P45059 | 1-hexadecanoyl-2-succinyl-sn-glycero-3-phospho-(1'-sn-glycerol) | 584.2964 | 585.3055 | 131 |
| P46718 | 276.6279 | 277.6353 | 131 | |
| P53547 | PA(i-12:0/5-iso PGF2VI) | 662.3876 | 663.3948 | 131 |
| P55453 | Mangiferin 6'-gallate | 574.0981 | 575.1037 | 131 |
| P08500 | Carpachromene dimethyl ether | 364.1312 | 365.1390 | 130 |
| P09738 | Gelsemicine | 358.1880 | 359.1951 | 130 |
Explore by Gene
Search genes by gene ID, alias, description, or Arabidopsis ortholog information.
| Gene ID | Alias | Description | Arabidopsis ortholog | Associated metabolites (overlap) |
|---|---|---|---|---|
| Glyma.10G082200 | hypothetical protein | NA | 119 | |
| Glyma.13G134000 | hypothetical protein | NA | 119 | |
| Glyma.17G137100 | hypothetical protein | AT4G22860:AT4G22860:Cell cycle regulated microtubule associated protein | 119 | |
| Glyma.18G266200 | hypothetical protein | NA | 119 | |
| Glyma.09G062200 | hypothetical protein | AT2G19350:AT2G19350:transmembrane protein (DUF872) | 118 | |
| Glyma.12G193800 | hypothetical protein | AT2G05710:ACO3:aconitase 3 | 118 | |
| Glyma.13G319600 | hypothetical protein | AT5G22740:CSLA02:cellulose synthase-like A02 | 118 | |
| Glyma.18G044900 | hypothetical protein | AT1G66120:AAE11:AMP-dependent synthetase and ligase family protein__AT1G68270:AT1G68270:AMP-dependent synthetase and ligase family protein | 118 | |
| Glyma.20G022500 | hypothetical protein | NA | 117 | |
| Glyma.08G182400 | hypothetical protein | NA | 116 |