Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P43147 Avermectin A2b monosaccharide 746.4252 747.4310 179
P43543 26-O-beta-D-glucopyranosyl-(25R)-furost-5,16(17),20(22)-trien-3beta,26-diol-3-O-alpha-l-rhamnopyranosyl-(1-2)-beta-D-glucopyranoside 882.4555 883.4653 179
P43704 3'''-O-Methylfukugetin 570.1129 571.1194 179
P53747 Methyl ent-16-methoxy-6-oxo-7,13E-labdadien-15-oate 362.2443 363.2517 179
P02880 183.5443 184.5519 178
P07726 Tolmetin glucuronide 433.1375 434.1439 178
P08737 3-Isopentadienyl-3',4,5'-trihydroxystilbene 294.1273 295.1337 178
P14990 Enkephalin L 555.2689 556.2764 178
P15582 853.3764 854.3854 178
P18621 (4Z,6Z)-Octa-4,6-dienoylcarnitine 283.1757 284.1837 178

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.06G202200 hypothetical protein AT1G74310:HSP101:heat shock protein 101 121
Glyma.16G138500 hypothetical protein NA 121
Glyma.18G212700 hypothetical protein AT5G01820:SR1:serine/threonine protein kinase 1 121
Glyma.20G217100 hypothetical protein AT1G64640:ENODL8:early nodulin-like protein 8 121
Glyma.12G186000 hypothetical protein AT5G09225:AT5G09225:uncharacterized protein 120
Glyma.13G133800 hypothetical protein AT3G53520:UXS1:UDP-glucuronic acid decarboxylase 1 120
Glyma.13G133900 hypothetical protein NA 120
Glyma.14G150000 hypothetical protein AT1G21830:AT1G21830:uncharacterized protein 120
Glyma.16G141300 hypothetical protein AT4G36710:HAM4:GRAS family transcription factor 120
Glyma.16G141600 hypothetical protein AT5G66710:AT5G66710:Protein kinase superfamily protein__AT3G50720:AT3G50720:Protein kinase superfamily protein 120