Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P22190 1,2,3,4-Tetrahydroisoquinolin-1-yl formate 177.0771 178.0839 112
P22928 5'-Methoxybilobetin 582.1182 583.1188 112
P27128 776.3766 777.3825 112
P29586 Lotusanine B 620.3029 621.3105 112
P30035 Homalomenol E 256.2015 257.2082 112
P32326 3'-Hydroxy T-2 toxin 482.2115 483.2198 112
P33512 Kinetensin 4-7 571.2856 572.2882 112
P33795 Romucosine F 433.1285 434.1358 112
P35845 Fluvirucin B4 603.4164 604.4224 112
P38305 Kirrothricin 780.4552 781.4660 112

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.06G202200 hypothetical protein AT1G74310:HSP101:heat shock protein 101 121
Glyma.16G138500 hypothetical protein NA 121
Glyma.18G212700 hypothetical protein AT5G01820:SR1:serine/threonine protein kinase 1 121
Glyma.20G217100 hypothetical protein AT1G64640:ENODL8:early nodulin-like protein 8 121
Glyma.12G186000 hypothetical protein AT5G09225:AT5G09225:uncharacterized protein 120
Glyma.13G133800 hypothetical protein AT3G53520:UXS1:UDP-glucuronic acid decarboxylase 1 120
Glyma.13G133900 hypothetical protein NA 120
Glyma.14G150000 hypothetical protein AT1G21830:AT1G21830:uncharacterized protein 120
Glyma.16G141300 hypothetical protein AT4G36710:HAM4:GRAS family transcription factor 120
Glyma.16G141600 hypothetical protein AT5G66710:AT5G66710:Protein kinase superfamily protein__AT3G50720:AT3G50720:Protein kinase superfamily protein 120