Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P09081 623.2447 624.2476 126
P09944 Waltherione A 393.1580 394.1665 126
P10660 L-gamma-Glutamyl-S-allylthio-L-cysteine 322.0663 323.0728 126
P12516 Gallic acid 170.0196 171.0281 126
P13309 4-Phenethylphenol 198.1061 199.1131 126
P17776 2'-Dehydrokanamycin A 482.2226 483.2303 126
P20643 728.2711 729.2757 126
P26285 175.0710 176.0774 126
P27902 Acarbose 645.2547 646.2547 126
P28677 10-ethoxy-2methylene-10-oxodecanoic acid 242.1473 485.3054 126

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.06G202200 hypothetical protein AT1G74310:HSP101:heat shock protein 101 121
Glyma.16G138500 hypothetical protein NA 121
Glyma.18G212700 hypothetical protein AT5G01820:SR1:serine/threonine protein kinase 1 121
Glyma.20G217100 hypothetical protein AT1G64640:ENODL8:early nodulin-like protein 8 121
Glyma.12G186000 hypothetical protein AT5G09225:AT5G09225:uncharacterized protein 120
Glyma.13G133800 hypothetical protein AT3G53520:UXS1:UDP-glucuronic acid decarboxylase 1 120
Glyma.13G133900 hypothetical protein NA 120
Glyma.14G150000 hypothetical protein AT1G21830:AT1G21830:uncharacterized protein 120
Glyma.16G141300 hypothetical protein AT4G36710:HAM4:GRAS family transcription factor 120
Glyma.16G141600 hypothetical protein AT5G66710:AT5G66710:Protein kinase superfamily protein__AT3G50720:AT3G50720:Protein kinase superfamily protein 120