Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P33213 785.3932 786.4008 130
P34366 Tubastrindole G 509.2190 510.2243 130
P34649 1-eicosyl-glycero-3-phosphate 452.3227 453.3320 130
P37800 3,4-Dihydroxybenzyltartaric acid 272.0560 273.0646 130
P39700 Minutoside A 662.3230 663.3329 130
P40520 17alpha-Methylestradiol 286.1913 287.2002 130
P43317 Mutant IDH1 inhibitor 466.2691 467.2767 130
P45730 3beta-Sulfooxy-7beta-N-acetylglucosaminylchol-5-en-24-oylglycine 732.3037 733.3078 130
P47122 3-[1-[3-(Dimethylamino)propyl]-5-methoxy-1H-indol-3-yl]-4-(1H-indol-3-yl)-1H-pyrrole-2,5-dione 442.2002 443.2073 130
P47239 525.7993 526.8021 130

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.06G202200 hypothetical protein AT1G74310:HSP101:heat shock protein 101 121
Glyma.16G138500 hypothetical protein NA 121
Glyma.18G212700 hypothetical protein AT5G01820:SR1:serine/threonine protein kinase 1 121
Glyma.20G217100 hypothetical protein AT1G64640:ENODL8:early nodulin-like protein 8 121
Glyma.12G186000 hypothetical protein AT5G09225:AT5G09225:uncharacterized protein 120
Glyma.13G133800 hypothetical protein AT3G53520:UXS1:UDP-glucuronic acid decarboxylase 1 120
Glyma.13G133900 hypothetical protein NA 120
Glyma.14G150000 hypothetical protein AT1G21830:AT1G21830:uncharacterized protein 120
Glyma.16G141300 hypothetical protein AT4G36710:HAM4:GRAS family transcription factor 120
Glyma.16G141600 hypothetical protein AT5G66710:AT5G66710:Protein kinase superfamily protein__AT3G50720:AT3G50720:Protein kinase superfamily protein 120