Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P45201 Reduced ketanserin 397.1809 398.1901 151
P46667 1558.8251 780.4180 151
P50770 195.5809 196.5888 151
P55369 Amprenavir 505.2250 506.2316 151
P04083 2-[(4-Phenoxyphenyl)sulfonylmethyl]thiirane 306.0384 307.0460 150
P04213 5,6-Dihydroxy-7,8,4'-trimethoxyflavanone 346.1039 347.1114 150
P06527 242.0408 243.0484 150
P06756 Sertraline 305.0731 306.0811 150
P08828 Thorectandramine 437.1702 438.1784 150
P09793 Butanoic acid, 3-((2-naphthalenylsulfonyl)amino)-4-oxo-4-((2-phenylethyl)amino)-, (S)- 426.1184 427.1241 150

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.13G224300 hypothetical protein NA 123
Glyma.18G006800 hypothetical protein AT1G67370:ASY1:DNA-binding HORMA family protein 123
Glyma.07G069600 hypothetical protein AT4G00370:ANTR2:Major facilitator superfamily protein 122
Glyma.10G264300 Mediator of RNA polymerase II transcription subunit 21 AT4G04780:MED21:mediator 21 122
Glyma.10G272800 hypothetical protein AT1G25350:OVA9:glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS 122
Glyma.12G002400 hypothetical protein AT5G47850:CCR4:CRINKLY4 related 4 122
Glyma.15G219200 hypothetical protein NA 122
Glyma.16G137000 hypothetical protein NA 122
Glyma.16G137100 hypothetical protein NA 122
Glyma.19G027700 hypothetical protein AT5G15440:EDL1:EID1-like 1 122